About Fabio Cumbo

I’m a Software Engineer with a Ph.D. in Computer Science and Automation Engineering, currently Postdoctoral Researcher at the Blankenberg Lab, Center for Computational Life Sciences, Lerner Research Institute of the Cleveland Clinic, Cleveland, Ohio, USA.

Have a look at my professional profile, including my working experiences, achievements, and academic contributions, on my Curriculum Vitae.

You can find all my published scientific articles in peer-reviewed journals, conference proceedings, and pre-prints on my Google Scholar profile.

I’m always available for new collaborations! Get in touch with me at fabio.cumbo@gmail.com or cumbof@ccf.org

Research Interests

My research interests include but are not limited to:

  • Bioinformatics: with a research experience of over 10 years, my interests cover a wide spectrum of research areas under the bioinformatics domain with a particular emphasis on Metagenomics and the design of new computational techniques for the characterization of known and yet-to-be-named microbial species.

  • Machine Learning: experienced in teaching modern Big Data Analytics and Visualization techniques, I also designed novel energy- and memory-efficient machine learning methods for dealing with massive amounts of biomedical data with commodity hardware as well as in distributed environments.

  • Hyperdimensional Computing: a.k.a. Vector-Symbolic Architectures, this is an emerging way of computing with vectors in a high-dimensional space. As a new computational paradigm, it has an innumerable fields of application, including artificial intelligence, cognitive science, robotics, natural language processing, bioinformatics, and the internet of things, among other scientific disciplines.

Highlights

DateEvent
03/2024πŸ† Cleveland Clinic Excellence Award in recognition of demonstrated exceptional outstanding achievements
11/2023πŸ—£οΈ Invited speaker at the Institute for Systems Analysis and Computer Science β€œAntonio Ruberti” in Rome, Italy, with two talks titled β€œTowards revealing the hidden diversity of the microbial dark matter and its relation to host health and environmental factors” and β€œComputing with high-dimensional vectors: theory and applications in bioinformatics”
07/2023πŸ—£οΈ Presented β€œInvestigating the known and unknown microbial composition of metagenomic samples made easy with MetaSBT in Galaxy” with a poster and talk at the Galaxy Community Conference (GCC2023) in Brisbane, Queensland, Australia
09/2022πŸ—£οΈ Presented β€œFeature selection with vector-symbolic architecture: a casa study on microbial profiles of shotgun metagenomic samples of colorectal cancer” with a poster at the 9th Annual Genetics Education Symposium organized by the Cleveland Clinic Genomic Medicine Institute and the Center for Personalized Genetic Healthcare in Cleveland, OH, USA
08/2022πŸŽ“ Certificate of Quantum Excellence issued by IBM for successfully completing the Qiskit Global Summer School 2022
07/2022πŸ—£οΈ Presented β€œMicrobial Strain Characterization and Subtyping of Metagenome-Assembled Genomes With Sequence Bloom Trees in Galaxy” with a poster and talk at the Galaxy Community Conference (GCC2022) in Minneapolis, MN, USA
05/2022πŸ† Awarded with the Galaxy Community Conference (GCC2022) Fellowship
03/2022🌱 Started a new position as Postdoctoral Fellow at the Blankenberg Lab, Genomic Medicine Institute, Lerner Research Institute, Cleveland Clinic, OH, USA